The Second Northernmost Cave-adapted Fish in the
World? Groundwork on the
Tytoona Cave Sculpin Population
Luis Espinasa, Alexandra Mendyk, Emily Schaffer, and Amy Cahill
Northeastern Naturalist, Volume 20, Issue 1 (2013): 185–196
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2013 NORTHEASTERN NATURALIST 20(1):185–196
The Second Northernmost Cave-adapted Fish in the
World? Groundwork on the
Tytoona Cave Sculpin Population
Luis Espinasa1,*, Alexandra Mendyk1, Emily Schaffer1, and Amy Cahill1
Abstract - A new cave population of sculpin fish from Central Pennsylvania is described
that, if confirmed to be cave adapted, would become the second northernmost caveadapted
fish in the world. The Tytoona Cave fish lack the suite of modifications typical
of troglomorphic populations. Their eyes, pectoral fins, and mouths appear to be as large
as those of their surface counterparts, they have the same number of cephalic lateralis
pores, and their pigmentation levels do not appear to be much lower. Nonetheless, they
are considered to be cave adapted due to the presence of ovigerous females, a lack of
evidence for starvation, and primarily because the cephalic lateralis pores (part of the
lateral line system) are significantly larger than those of similar-sized surface fish. It may
be that the Tytoona Cave population only has some emergent cave adaptations because in
high latitudes the extent of polar ice sheet migration during the Pleistocene era restricted
colonization by fish at least until 12 ka ago, when the ice age ended.
Introduction
Since the description of the first cave-adapted fish, Amblyopsis spelaea (De
Kay 1842), over 100 species of fish with troglomorphic traits (e.g., reduction in
pigmentation and eyes) have been found in caves and other subterranean habitats
around the world (Burr et al. 2001; Espinasa et al. 2001; Proudlove 2006, 2010;
Romero and Paulson 2001). In the development of modern biology as a science,
cavefish have played a significant role. For example, in the relatively new field of
evolutionary developmental biology (Evo-Devo), cavefish have been viewed as a
model system since they have revealed some of the molecular and cellular mechanisms
involved in trait modification, the number and identity of the underlying
genes and mutations, the molecular basis of parallel evolution, and the evolutionary
forces driving adaptation to the cave environment (Jeffery 2001, 2009, 2010).
Contrary to popular belief, the importance of cavefish and other cave animals does
not rest solely on their degenerate depigmentation or eyeless attributes. Cavefish
have evolved constructive adaptations as well, such as specialized appendages,
longer life spans, hypersensitive olfactory systems, and revamped gustatory and
mechanosensory systems (Culver and Pipan 2009, Poulson and White 1969).
In high latitudes, troglomorphic fish are absent despite the presence of caves
and other suitable subterranean habitat (Romero and Paulson 2001, Proudlove
2006). One factor that likely constrains the distribution of cavefishes is the extent
of polar ice sheet migration during the glacial periods of the Pleistocene Epoch.
At the peak of the last Wisconsinan Period ≈20 ka ago, ice sheets covered most
1School of Science, Marist College, 3399 North Road, Poughkeepsie, NY 12601. *Corresponding
author - luis.espinasa@marist.edu.
186 Northeastern Naturalist Vol. 20, No. 1
of the Northern Hemisphere above 40–50°N (Flint 1971). Therefore, most northern
caves were not available for colonization by fish until 12 ka ago, when the
Wisconsinan Period ended.
Espinasa and Jeffery (2003) described the northernmost cave-adapted fish
in the world (41°9'N). This population of sculpin (Cottidae: Scorpaeniformes:
Actinopterygii) inhabits Eiswert #1 Cave (Stone 1953) in the Nippenose Valley,
Lycoming County, in Central Pennsylvania and was assigned to the Cottus
bairdi-cognatus complex (Espinasa and Jeffery 2003). Individuals of this cave
population retain, although reduced, functional eyes and some pigmentation. They
are morphologically distinct from surface sculpin of nearby streams by their wider
and more abundant mandibular pores (Fig. 1), wider heads, longer pectoral fins,
Figure 1. Lateral
views of heads.
A) Pennsylvania
Grotto Sculpin
from the Nippenose
Valley. B)
Surface fish from
the Nippenose Valley.
Arrows point
to mandibular pore
VI (below) and the
extra pore (above)
found in troglomorphic
specimens
in the Nippenose
Caves, but absent
in those from Tytoona
Cave. Size
differences in the
pores between A
and B are similar
to the differences
found between Tytoona
Cave specimens
and surface
fish. Tytoona Cave
specimens have
large eyes as in B.
Scale bar: 0.5 cm.
(Photo from Espinasa
and Jeffery
2003).
2013 L. Espinasa, A. Mendyk, E. Schaffer, and A. Cahill 187
and reduced tectum opticum (area of the brain dedicated to vision). The common
name by which they are now known is the Pennsylvanian Grotto Sculpin.
Eiswert #1 Cave is part of the West Branch of the Susquehanna River drainage.
Because of the occurrence of large karst areas with caves along its West
Branch and the presence of the assumed ancestral species of the Pennsylvanian
Grotto Sculpin (Espinasa and Jeffery 2003), the Cottus bairdi Girard (Mottled
Sculpin) and/or the Cottus cognatus Richardson (Slimy Sculpin), within the
drainage, it is possible that other populations of sculpins may have successfully
invaded the cave environment.
After interviewing several members of the local caver community, it was
revealed that there were sightings of sculpin within the subterranean stream of
Tytoona Cave, near the town of Altoona, Blair County, also in Central Pennsylvania
(Fig. 2). The objective of this study is to assess if the Tytoona sculpin
population is cave-adapted, which would make it the second cave-adapted population
in the world north of 40°N.
Methods
Field-site description
Tytoona Cave Nature Preserve is located in Sinking Valley, Blair County, PN,
(40°36'04"N, 78°13'01"W., 274 m.a.s.l.; Fig. 2) between the cities of Tyrone and
Altoona (hence the name). This preserve is owned by the National Speleological
Society. The large 10- x 5-m cave entrance (Fig. 3) is located in the bottom
of a large wooded sinkhole with a running stream. The surrounding area has no
surface streams. A stream connection to nearby Arch Spring (Fig. 4) has been
identified by dye tracing, and is 1.22 km straight-line distance from the main cave
Figure 2. Map of Pennsylvania showing the location of Tytoona Cave and Arch Spring ().
188 Northeastern Naturalist Vol. 20, No. 1
Figure 3. Entrance to Tytoona Cave. Tytoona Cave Nature Preserve is located in Sinking
Valley, Blair County, PA. On the right side of the photo, the level of water of the stream at
the time of the study can be seen. Fish were found throughout the cave along this stream.
2013 L. Espinasa, A. Mendyk, E. Schaffer, and A. Cahill 189
entrance to Tytoona Cave. Water from the spring flows into the surface stream of
Sinking Run, which drains into the Little Juniata River, continues to the Juniata,
and ultimately joins with the Susquehanna River. Tytoona Cave has a surveyed
passage length of 1140 m, and is the 19th longest cave in Pennsylvania. When the
surveyed passage in Arch Spring is added, the total known length of the system
is approximately 1780 m. The estimate of a 50-m connection separating the explored
sections of Tytoona and Arch Spring caves has been made via dye tracing.
This sections remains to be dived, surveyed, and mapped. A detailed description
of the cave and map of Tytoona/Arch Spring caves can be found in White and
White (2012) and on the Tytoona Cave Nature Preserve Management Plan web
page. Many of the cave’s passages are completely underwater with no air space
(sumps), so humans can only explore them with scuba diving equipment. The
current study was restricted to the area prior to the first sump between the entrance
of the cave and the first 120 m, where there is a log jam .
At the time of the study (3/31/12), the stream averaged around 3 m of width
and 0.5 m in depth flowing quickly over gravel floors (Fig. 3), with a few calm
pools at the sides. Sculpin were primarily observed in the main current, typically
resting in eddies formed behind small rocks, but could also be found in the calm
pools. Surface sculpins in Arch Spring and in Sinking Run were abundant and
were typically found under rocks or mats of algae.
Specimen collection
Specimens were collected from Tytoona Cave, Arch Spring, the Sinking Run,
and the Little Juniata. In agreement with the Preserve Management Chair and
because this was a preliminary study conducted within a nature preserve, sculpins
were released unharmed after initial capture and collection of data within the
cave. Exceptions included surface specimens and a single cave specimen, which
were preserved in 10% formalin. Sampling occurred on 30 and 31 March 2012.
Specimens in the cave were located using headlamps and then collected with
40-cm-wide handheld bait nets. Specimens from the surface were collected using
seines or handheld bait nets by disturbing rocks and algae. Standard length,
head width, eye length, and pectoral fin length were measured with dial calipers to
the nearest 0.1 mm. Mass was measured in the field with a portable balance to the
nearest 0.01 g. Digital photographs of the body and the head, with the mandibular
pores in the lateral plane on focus, were also taken while in the field. We measured
mandibular pore #3 to the nearest 0.01 mm and assessed, from the digital photographs,
if mandibular pore VI was a single pore (Fig. 1B), as in surface sculpin, or
if there were two pores (Fig. 1A) as in some of the Pennsylvania Grotto Sculpins.
Figure 4 (opposite page, bottom). Arch Spring is the resurgence of the Tytoona Cave
system. Surface sculpin are abundant at this location. Excluding the conditions associated
with the cave environment, such as continuous darkness, no major physical barrier
exists between the resurgence and Tytoona Cave that a sculpin cannot overcome by
swimming upstream. Humans using scuba have explored most of the galleries between
the resurgence at Arch Spring and Tytoona Cave, with the exception of an estimated 50-m
underwater connection (White and White 2012).
190 Northeastern Naturalist Vol. 20, No. 1
Statistical differences in the size of the eye, head, pectoral fin and mandibular pore
#3 were assessed using linear regressions and t-tests. Dissection of the abdomen
in the single lone cave specimen collected was done using a scalpel, dissection
needles, and a dissection microscope to confirm if it was a gravid female. The distal
edge of the right pectoral fin was cut from the captured cave specimens before being
released for population-size estimation and genetic analyses.
In agreement with the Preserve Management Committee, only one cave specimen
could be extracted from the cave. As a result, it was difficult to precisely
assess pigmentation differences between surface and cave specimens based on
photos taken under unequal illumination conditions of flash in the cave and outdoor
sunlight on the surface. Due to this factor, pigmentation results should be
interpreted with caution.
Population size
Specimens were captured and marked on the first day by cutting the distal
edge of the right pectoral fin. Specimens were released at the same place they
were collected. The number of specimens with the distinctive blunted edge on the
right pectoral fin recaptured on the second day was recorded and the following
formula was used: Total = (original number tagged x total recaptured) ÷ number
tagged on recapture.
Sculpin are slow swimmers that lay motionless in the bottom of the stream for
extended periods of time. Therefore, we assume that the 24 hrs allowed to pass
between the two captures was sufficient for the marked individuals to redistribute
themselves among the unmarked individuals only in close proximity. We also assume
that this is a random mixture for only a very local population estimate and
certainly not for the total population.
Genetic analyses
Tissue samples were deposited in 100% ethanol. Total DNA was extracted from
fin clippings using the Qiagen DNEasy® Tissue Kit. Polymerase chain reaction was
used to amplify and sequence the 16S rRNA mitochondrial marker using the 16Sar
and 16Sb primer pair following protocols in Edgecombe et al. (2002). Amplification
was carried out in a 50-μl volume reaction, with 1.25 units of AmpliTaq® DNA
Polymerase (Perkin Elmer, Foster City, CA), 200 μM of dNTPs, and 1 μM of each
primer. PCR products were purified with the Qiagen QIAquick® Gel Extraction
Kit and directly sequenced using an automated ABI Prism® 3700 DNA analyzer
as in Espinasa et al. (2007). Electropherograms obtained were read using the DNA
sequence-editing software SequencherTM 3.0. Sequences were then compared between
the cave fish and the surface fish and against published sequences found in
the Genbank. Alignment was done with ClustalW.
Results
Morphology
The Pennsylvanian Grotto Sculpins from Eiswert #1 Cave have a suite of
modifications that readily identify them as cave-adapted: smaller eyes, elongated
2013 L. Espinasa, A. Mendyk, E. Schaffer, and A. Cahill 191
pectoral fins, broader heads and mouths, and more numerous and enlarged cephalic
lateralis pores compared to surface sculpin. The Tytoona Cave population
lacks most of this suite of characters. Eyes are as large as their surface counterparts
(0.5 < P < 0.8), the width of their head is equivalent (0.2 < P < 0.5), and
they lack the extra mandibular pore VI found in some Grotto Sculpins; therefore,
the number of cephalic lateralis pores is the same as in the surface fish. The cave
specimens even have shorter instead of longer pectoral fins when compared with
their surface counterparts (P < 0.001), although this result should be considered
with caution because it was noticed that the cave specimens had some type of fin
infections that shredded their fin tips.
Nonetheless, we were able to document a distinct difference in the Tytoona
population. Cephalic lateralis pore size (Fig. 1) is a clear discriminating feature
between Tytoona Cave fish and surface fish (Fig. 5). The cave population has
distinctly larger pore size than similar-sized surface fish (P < 0.001). Mandibular
pore III of cave sculpin was approximately 20% larger than those from surface
specimens.
Both Tytoona cave and surface sculpin show considerable variability in
pigmentation and color patterns (Fig. 6). Cave sculpin are not albino and have
well-developed pigmentation. Nonetheless, the previously described Pennsylvanian
Grotto Sculpin from Eiswert #1 Cave, which is considered cave-adapted,
are also not albino and have variable pigmentation levels as well. In contrast to
the sculpins in Eiswerth #1, where the extreme lowest pigmented specimens are
clearly depigmented when compared with surface specimens, sculpin in Tytoona
Cave do not appear to have that level of depigmentation. A few cave specimens
Figure 5. Mandibular pores
III of the Tytoona Cave fish
are about 20% larger than
those from surface samples
of equivalent standard length
(SL). Cephalic lateralis pore
size is a clear discriminating
feature between cave fish and
surface fish. The cave population
has distinctly larger pore
size than similar-sized surface
fish (P < 0.001).
192 Northeastern Naturalist Vol. 20, No. 1
may be beyond the lowest levels of pigmentation of sculpin found in adjacent
surface habitats.
On the date of collection (30–31 March), it was evident that many specimens,
both from the surface and the cave, had distended abdomens (Fig. 6B).
Dissections made of several surface specimens and of the single preserved cave
specimen showed they were females carrying eggs. Since a single cave female
was available, sample size is inadequate to statistically assess if the number
and size of eggs is different from the surface, although in appearance they were
within the normal range of the surface specimens dissected. The existence in the
cave of ovigerous females and of individuals spanning a broad range of sizes
(2.2–7.4 cm) supports that this may be a population breeding wi thin the cave.
Weight
The weight per unit of length can reveal much about the condition of a fish
population inhabiting a particular environment. Accidental, non-cave-adapted
organisms found in caves are often lean as a result of weight loss due to starvation
(Hervant 2012). The Tytoona Cave population shows no evidence of being
in a different condition than that of their surface counterparts. Their weight per
unit of length is nearly identical to the surface specimens (Fi g. 7).
Figure 6. Variability of pigmentation and color patterns in the Tytoona Cave sculpin.
While most cave-fish pigmentation levels are within the range of surface fish (A and C),
some may be less pigmented (B). Specimen B is also an ovigerous female, as seen by the
distended abdomen.
2013 L. Espinasa, A. Mendyk, E. Schaffer, and A. Cahill 193
Population size
Fifteen specimens were marked on the first day, and only two of these were
recaptured on the second day, when eighteen specimens were collected. This
resulted in an estimate of a local population size of 135 indiv iduals.
The estimated 135 local individuals came from about only 120 m of gallery
because we assume that the 24 hrs allowed to pass between the two captures was
sufficient for the marked individuals to redistribute themselves among the unmarked
individuals in close proximity to give a random mixture for only a very
local population estimate and certainly not for the total population. The river
passage to the spring has a minimum of 1220 m, and therefore, it is reasonable
to expect that the fish population is composed of hundreds and maybe even thousands
of individuals.
DNA sequences
Molecular data have been obtained for 15 individuals: 14 samples from Tytoona
Cave and one from a surface specimen from the Little Juniata River. The
16S rRNA fragments with primers excluded were 575 bp long. All cave and surface
specimens had identical sequences, which when compared with the available
Genbank sequences, were identical to “haplotype 2” of a Cottus bairdi collected
from Blockhouse Creek in central Pennsylvania (GenBank# GQ280792.1) and
four bp (0.7%) different from another C. bairdi of undescribed provenance (Gen-
Bank# AY539018.2).
Discussion
Reports from local cavers indicate that Tytoona Cave in Central Pennsylvania
is inhabited by a population of sculpins. The relevant question to be answered is:
are they simply surface fish that have somehow ended up inside the cave, or is
Figure 7. Tytoona Cave fish
has the same weight as those
from surface samples of
equivalent standard length
(SL). No evidence for starvation
is present. It appears
that the cave population is
efficient in obtaining energy
from the food resources available
in the cave. This finding
implies that the Tytoona population
may be sufficiently
adapted to exploit the resources
of the cave niche.
194 Northeastern Naturalist Vol. 20, No. 1
this a unique, cave-adapted population? If proven cave adapted, it would be the
second northernmost cave-adapted fish in the world.
In this study, we show that Tytoona Cave is inhabited by a population of
sculpin whose mitochondrial DNA place them within the Cottus bairdi group.
The characters normally used in recognizing troglomorphic fish, reduction
or loss of eyes and pigmentation, are not pronounced in the Tytoona Cave
fish. This finding by itself, however, is not significant. The two previously
described populations of cave-adapted sculpin, the Pennsylvanian Grotto Sculpin
(Espinasa and Jeffery 2003) and the Missouri Grotto Sculpin (Burr et al.
2001), both have eyes and pigment, but are still considered cave-adapted.
The reason is that, for example, the sculpins from the Nippenose Valley caves
have a suite of morphological traits that readily identify them as cave-adapted:
smaller eyes, elongated pectoral fins, more numerous and enlarged cephalic
lateralis pores, a broader head, reduced average pigmentation, degenerated
retinas, increased subdermal fat reserves, and a size reduction of the tectum
opticum in the brain (Espinasa and Jeffery 2003).
Not all of the aforementioned characters could be determined in the Tytoona
Cave population because they require sacrificing multiple specimens. In agreement
with the Tytoona Cave Nature Preserve Management Committee, gathering
of data was immediately followed by release of all captured specimens, with the
exception of a single individual. Therefore morphology of retina, subdermal fat
reserves, and brain features were not examined. Overall results should be considered
preliminary due to the intrinsic difficulties of measuring in the field under
the trying conditions of total darkness and high humidity insid e a river cave.
Data shows that the Tytoona Cave population lacks most of the aforementioned
suite of modifications. They have eyes as large as their surface counterparts, the
length of pectoral fins and head is equivalent, they have the same number of cephalic
lateralis pores and the degree of pigmentation is similar.
While the above data would support that they are simply surface fish that entered
the cave, there is also evidence that this is truly a cave-adapted population.
Surface organisms that accidentally end up in caves are typically starving and
cannot reproduce inside the cave environment. Cave-adapted organisms, on the
contrary, can thrive and reproduce. In the Tytoona Cave population, the absence
of evidence for starvation and the presence of ovigerous females supports that
this is a population adapted to survive and reproduce in the cave. But of highest
relevance, they also appear to be morphologically distinct, having enhanced
mechanosensory systems. The cephalic lateralis pores, which are part of the lateral
line system, are significantly larger than similar-sized sculpin from adjacent
surface habitats. Mandibular pores of the cave sculpin are about 20% larger than
those of surface sculpin. These enlarged pores may enhance the mechanosensory
detection of small water vibrations, such as those from prey that need to be detected
in the darkness of the cave. It would be interesting to see if the population
near the entrance of Arch Spring, where cave and surface fish may be in contact,
show a gradient of mandibular pore size, but to collect in this area requires scuba
diving techniques, which was beyond the means of this study .
2013 L. Espinasa, A. Mendyk, E. Schaffer, and A. Cahill 195
While the Tytoona Cave sculpin can be considered troglophiles because they
are able to thrive and reproduce in the cave environment, they certainly have
fewer troglomorphic characters than those of previously reported cave-adapted
sculpins (Burr et al. 2001, Espinasa and Jeffery 2003). By comparison, the
Tytoona Cave population has only some emergent cave adaptations, reflecting
either a more recent divergence from surface C. bairdi, or that gene flow is still
present. Gene flow into a population can counteract the effects of selection on
gene frequency, imposing a limit on local adaptation (Lenormand 2002). If there
is gene flow between the surface sculpin and the Tytoona population, it could be
preventing the differentiation of characters except for those that are most selectively
essential for survival inside the cave.
As for a recent divergence, in high latitudes, the extent of polar ice sheet
migration during the Pleistocene era has restricted colonization of caves until at
least 12 ka ago, when the region was no longer covered by ice sheets. The lack
of belowground species in northern latitudes, despite suitable habitats, might be
attributed to extinctions during Pleistocene glaciations and the inability of rangerestricted
taxa to re-colonize these regions (Schuldt and Assmann 2011). As a
result, available evolutionary time has been limited for northern cave fish. It may
be that the available time, restriction of gene flow, and/or strength of other evolutionary
forces have been sufficient enough to enhance mechanosensory systems,
but have yet to regress eyes and pigmentation in the Tytoona Cave population.
Finally, our study indicates a healthy population size of hundreds or potentially
even thousands of individuals. For conservation purposes, the population
does not appear to be at imminent risk, but results of this population size pilot
study should be interpreted with caution, as its design was not to obtain the actual
total population size, but only to provide a baseline on which the Preserve
Management Committee could better assess the impact of biological studies on
this population.
Acknowledgments
We thank Garrett Czmor, Tytoona Cave Nature Preserve Management chair, for providing
the permit to study the cave population at Tytoona Cave. We also acknowledge
his support while in the field which, among others, allowed us access to Arch Spring.
Tom Metzgar is the caver who first brought to our attention the presence of the sculpin
population. He then helped us in every field trip and supported the project in many ways.
Without him, this project would never have developed. Emily Collins, Matthew Ruis,
Courtney Millar, Nina Garoffolo, and Maria Yurgel helped either the field or in the laboratory.
DNA sequencing was performed by students of the Spring 2012 BIOL320-113
course on genetics at Marist College. Partial support for the project came from the School
of Science and VPAA grants of Marist College.
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